Appendices

• Associating Annotions with VR Objects
• Design Decisions
  • Variation Rather than Variant
  • Allele Rather than Variant
  • Alleles are Fully Justified
  • Interbase Coordinates
  • Modelling Language
  • Serialization Strategy
• Development Process
  • Versioning
  • Release Cycle
  • Leadership
• Future Plans
  • Overview
  • Intervals and Locations
  • State Classes
  • Variation Classes
  • Rule-based Variation
  • Variation Sets
• Proposal for GA4GH-wide Computed Identifier Standard
  • Background
  • Proposal
  • Type Prefixes
  • Administration
• Implementations
  • Libraries
  • Applications and Web Services
• Truncated Digest Collision Analysis
  • Conclusions
  • Digest Timing
  • Collision Analysis
  • Choosing a digest size