GA4GH Variation Representation Specification
1.0
Introduction
Terminology & Information Model
Schema
Implementation Guide
Appendices
Associating Annotions with VR Objects
Design Decisions
Development Process
Future Plans
Proposal for GA4GH-wide Computed Identifier Standard
Implementations
Truncated Digest Collision Analysis
GA4GH Variation Representation Specification
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Appendices
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Associating Annotions with VR Objects
Design Decisions
Variation Rather than Variant
Allele Rather than Variant
Alleles are Fully Justified
Interbase Coordinates
Modelling Language
Serialization Strategy
Development Process
Versioning
Release Cycle
Leadership
Future Plans
Overview
Intervals and Locations
State Classes
Variation Classes
Rule-based Variation
Variation Sets
Proposal for GA4GH-wide Computed Identifier Standard
Background
Proposal
Type Prefixes
Administration
Implementations
Libraries
Applications and Web Services
Truncated Digest Collision Analysis
Conclusions
Digest Timing
Collision Analysis
Choosing a digest size
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